Last year Maciej Swat, Martijn Mone and I contributed a chapter to a book on "Systems Medicine" in the Methods in Molecular Biology series. This is now available as an epub and should be in print soon, our chapter is titled "Modeling and Simulation Tools: From Systems Biology to Systems Medicine".
My very old, new blog.
Showing posts with label systems biology. Show all posts
Showing posts with label systems biology. Show all posts
21 December 2015
30 June 2014
Final work discussion for this season
Had a great time presenting the design and implementation of CBMPy and how it can be used for model driven media design. Python, object-oriented programming, biochemistry, microbiology and algorithms all unleashed on an amazingly awake audience. Especially considering this happened the night before :-)
26 April 2014
Small core SBML L3+FBC model published in Biotechnology Journal
The first SBML3+FBC model (a small core model) published in support of this paper:
Basic concepts and principles of stoichiometric modeling of metabolic networks
Timo R. Maarleveld, Ruchir A. Khandelwal et. al
Biotechnology Journal, Volume 8, Issue 9, pages 997–1008, September 2013
Basic concepts and principles of stoichiometric modeling of metabolic networks
Timo R. Maarleveld, Ruchir A. Khandelwal et. al
Biotechnology Journal, Volume 8, Issue 9, pages 997–1008, September 2013
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